Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
PAAD rs3128783 chr4:2401548 C/T 0 178 0.4 16.1 15.37 KM Plot
PAAD rs3128784 chr4:2401542 C/T 0 178 0.4 16.1 15.37 KM Plot
PAAD rs3128785 chr4:2401396 G/C 0 178 0.4 16.1 15.37 KM Plot
PAAD rs3128787 chr4:2400133 T/C 0 176 0.4 16.17 15.37 KM Plot
PAAD rs3128788 chr4:2400031 C/T 0 177 0.4 16.13 15.37 KM Plot
PAAD rs3128789 chr4:2399947 G/A 0 177 0.4 16.13 15.37 KM Plot
PAAD rs3128790 chr4:2399946 T/C 0 177 0.4 16.13 15.37 KM Plot
PAAD rs3128792 chr4:2399677 C/T 0 176 0.4 16.17 15.37 KM Plot
PAAD rs3128793 chr4:2399518 C/T 0 177 0.4 16.13 15.37 KM Plot
PAAD rs3128794 chr4:2399456 T/C 0 177 0.4 16.13 15.37 KM Plot
PAAD rs3128795 chr4:2399413 G/T 0 177 0.4 16.13 15.37 KM Plot
PAAD rs3135072 chr4:2405106 A/G 0 178 0.4 16.1 15.37 KM Plot
PAAD rs3135073 chr4:2404948 A/G 0 178 0.4 16.1 15.37 KM Plot
PAAD rs3135074 chr4:2404843 T/G 0 178 0.4 16.1 15.37 KM Plot
PAAD rs3135075 chr4:2404125 A/G 0 178 0.4 16.1 15.37 KM Plot